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Department of Medical Microbiology and Immunology

Department of Medical Microbiology and Immunology

UC Davis Host-Microbe Systems Biology Core

  Contact the Host-Microbe Systems Biology Core
Please direct all inquiries regarding services and pricing to:
Matt Rolston - Core Manager
(530) 754-7850
mrrolston@ucdavis.edu
 

 

Name Change !!! - Welcome to the UC Davis School of Medicine Host-Microbe Systems Biology Core
In keeping with recent transitions in functional genomics research, the Microarray Core Facility will be expanding our services beginning in the summer of 2012 to include sample processing for Next-Generation Sequencing (NGS) and functional analysis of NGS data sets. Accordingly, our name will change from the “Microarray Core Facility” to the “Host-Microbe Systems Biology Core” (HMSBC).  The new NGS analytical services offered will utilize state-of-the-art open source software platforms and other customized scripts developed by the HMSBC co-Director Jonathan Eisen, Ph.D.  The new HMSBC is designed to provide campus researchers with easily accessible, customized, and cost-effective resources for integrating analyses of microbial community structure and host-microbe interactions in health and disease.

 

 New name - Same gene expression services available
The HMSBC will continue to provide researchers with access to cutting edge technology for examining gene expression profiling. Our services include:

  • Sample Labeling
  • Microarray Hybridization/Scanning
  • Sample Quality Control
  • Data Analysis
  • Assistance with Experimental Design

 

Gene Expression Profiling with Affymetrix GeneChips
The Core Facility features an Affymetrix GeneChip system for examining gene expression profiles in species of interest. A complete list of available GeneChips can be found at the Affymetrix website. For services and pricing, click here.  For a complete list of our equipment, click here.

 

Arcturus XT Laser Microdissection System now available

  The MCF has recently acquired an Arcturus XT laser microdissection system for isolating specific cells and cell types from cell populations and tissues. This technology can be utilized to isolate RNA and generate gene expression profiles from cells or tissues of interest. For more information, click here.

 

Data Analysis services available through the Microarray Core Facility
Please click here for more information regarding data analysis services offered through the Microarray Core Facility.

 

Taqman Services available for independent validation of Microarray results
Real-time PCR validation services are available through the Real-time PCR Research and Diagnostics Core Facility. Please visit their facility website by clicking here.


Host-Microbe Systems Biology Core
University of California, Davis
451 Health Sciences Drive
Genome & Biomedical Science Facility, Health Sciences
5th Floor, Rm 5212
Davis, CA 95616
(530) 754-7850