TB-170
One Shields Ave
Davis, CA 95616

annesmith@ucdavis.edu
tel: (530) 752-7813
fax:(530) 752-7807

Analysis of behavioral and spike train data using filtering techniques and state space modeling.

Analysis of behavior data software is available here.

Software for Bayesian analysis of learning is available here.

Smith AC, Roberts WW. Straightening of crimped and hooked fibers in converging transport ducts: Computational modeling. Textile Research Journal 1994; 64(6): 325-334.

Smith AC, Roberts WW. Computational modeling of fiber formation in spunbonding of polypropylene with crystallization: Comparison with experiments. International Nonwovens Journal 1994; 6(1): 31-41.

Smith AC, Wu XB, Levy WB. Controlling activity fluctuations in large,sparsley connected random networks. Network: Computation in Neural Systems 2000; 11:63-81.

Smith AC, Gerrard JL, Barnes CA, McNaughton BL. Effect of age on burst firing characteristics of rat hippocampal cells. NeuroReport 2000; 11:2865-71.

Smith AC, Brown EN. Estimating a state-space model from point process observations. Neural Computation 2003; 15: 965-991.

Wirth S, Yanike M, Frank LM, Smith AC, Brown EN, Suzuki WA. Single neurons in the monkey hippocampus and learning of new associations.Science 2003; 300: 1578-1581.

Smith AC, Frank LM, Wirth S, Yanike M, Hu D, Kubota Y, Graybiel AM, Suzuki WA, Brown EN. Dynamic analysis of learning in behavioral experiments. Journal of Neuroscience 2004; 24(2): 447-461.

Smith AC, Stefani MR, Moghaddam B, Brown EN. Analysis and design of behavioral experiments to characterize population learning. J.Neurophysiology, 2004, J.Neurophysiology (published online Sept. 29, 2004), 2005, 93:1776-1792.

Prerau MJ, Smith AC, Yanike M, Suzuki WA, Brown EN. A mixed filter algorithm for simultaneously recorded continuous-valued and binary observations. IEEE Transactions on Biomedical Engineering, 2004, Submitted.

Law JR, Flanery MA, Wirth S, Yanike M, Suzuki WA, Smith AC, Frank LM, Brown EN, Stark CEL. fMRI activity during the gradual acquisition and expression of paired-associate memory. Journal of Neuroscience 2005, 25(24): 5720-5729.

Smith AC, Smith P. A set probability technique for detecting relative time order across multiple neurons. Neural Computation 2005, In Press.
Software download is available here

Smith AC, Gerrard JL, Barnes CA, McNaughton BL. Altered firing characteristics of CA1 pyramidal cells during sleep in old rats. Society for Neuroscience Abstracts, 2000; 26:981.

Yanike MA, Wirth S, Frank LM, Smith AC, Brown EN and Suzuki WA. Categories of learning-related cells in the primate medial temporal lobe. Society for Neuroscience Abstracts, 2002.

Wirth S, Chiu C, Sharma V, Frank LM, Smith AC, Brown EN and Suzuki WA. Medial temporal lobe activity during the acquisition of new object-place associations. Society for Neuroscience Abstracts, 2002.

Smith AC, Wirth S, Yanike M, Suzuki WA and Brown EN. Bayesian Analysis of Neural Firing Rates. Joint Statistical Meetings Abstract, August 2003.

Wirth S, Chiu C, Sharma V, Frank LM, Smith AC, Brown E. and Suzuki WA. Learning related activity in the medial temporal lobe during the acquisition of object-place associations. Society for Neuroscience Abstracts, 2003.

Chiu C, Wirth S, Yanike M, Smith AC, Frank, LM, Brown, EN and Suzuki, WA. Learning strategies in monkeys performing associative memory tasks. Society for Neuroscience Abstracts, 2003.

Yanike M, Wirth S, Frank LM, Smith AC, Brown EN and Suzuki WA. Comparison of associative learning signals in the monkey hippocampus and perirhinal cortex. Society for Neuroscience Abstracts, 2003.

Mao J, Kubota Y, Smith AC, Brown EN and Graybiel AM. Development of signals predictive of behavioral outcome during procedural learning in the rat. Society for Neuroscience Abstracts, 2003.

Smith AC, Frank LM, Wirth S, Yanike M, Hu D, Kubota Y, Graybiel AM, Suzuki WA and Brown EN. Dynamic analysis of learning in behavioral experiments. Society for Neuroscience Abstracts, 2003.

Law JR, Wirth S, Yanike M, Suzuki WA, Smith AC, Frank LM, Brown EN, and Stark, CEL. fMRI activity during the gradual acquisition of associative memories over multiple trials. Society for Neuroscience, 2003.

Smith AC, Stefani MR, Moghaddam B, Brown EN. Variation in population learning: analysis and design of experiments. Society for Neuroscience Abstracts, 2004.

Salzman CD, Prerau MJ, Belova MA, Paton JJ, Smith AC, Brown EN. Bias estimation using dynamic estimation on binary measures of performance. Society for Neuroscience Abstracts, 2004.

Prerau MJ, Kubota Y, Graybiel AM, Smith AC, Brown EN. Estimating learning from simultaneously recorded continuous and discrete measures. Society for Neuroscience Abstracts, 2004.

Belova MA, Paton JJ, Smith AC, Scalon JD, Brown EN, Salzman CD. Emotional learning and behavioral context influence neural representations of value in monkey amygdala. Computational and Systems Neuroscience (CoSyne), Utah, March 2005.

Smith AC, Scalon JD, Wirth S, Yanike M, Suzuki W, Brown EN. A state-space model for neural spike train rate estimation. Computational Neuroscience Conference (CNS), Madison, WI, July 2005.

Wirth S, Chui C, Sharma V, Avsar, E, Smith AC, Scalon JD, Brown EN, Suzuki WA. Analysis of hippocampal signals during learning of selective object-place associations. Society for Neuroscience Abstracts, 2005.

Avsar E, Wirth S, Chui C, Sharma V, Smith AC, Scalon JD, Brown EN, Suzuki WA. Correct and error signals in the hippocampus during the reward and intertrial interval (ITI) period of an associative learning task. Society for Neuroscience Abstracts, 2005.

Smith AC, Wirth S, Yanike M, Suzuki W, Brown EN. Dynamic analysis of learning of multiple interleaved tasks. Society for Neuroscience Abstracts, 2005.